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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015933684.1_cds_XP_016479888.1_71384
CDS Infomation

[gene=LOC107801121] [db_xref=GeneID:107801121] [protein=hydroxyproline O-galactosyltransferase HPGT3-like isoform X3] [protein_id=XP_016479888.1] [location=complement(join(11024..11162,11641..11760,12386..12457,13348..13398,13589..13676,13770..13893,14158..14230,14315..14375,16482..16672,16770..16810))] [gbkey=CDS]
Sequence

ATGCTGACAGTTGAAGACAAGCTAATGGTTTTAGGATGCAAGGAACTGGAGAGGAGAATA
GTTGAAGTCGAAATGGAATTAACAGTGGCTAAGAGTCAAGGTTACCTCAAGAATCAGTTG
AAGCATAGTGGTTCATCTTCGGGCAAACAACTTCTGGCTGTTATAGGAATCTATACGGGA
TTCGGAGGTAGATTGAGGAGAAATGTGATCAGAGGGTCTTGGTTGCCAAATGTTGATGCT
TTGTCGAAACTTGAAGAAAGAGGAGTGGTTGTGCGATTTGTAATTGGTCGGAGTCCCAAC
CGTGGCGATAGCTTGGACCGCAATATTAATGAGGAGAACCGAGAAACAAAAGATTTCTTG
ATTCTAGAAAGTCATGAGGAAGCTCAGGAGGAGTTGCCCAAGAAAGCTAAATATTTCTTT
AGTTCAGCAATACAAAATTGGGACGCAGAGTTTTATGTGAAAGTTGATGACAACATTGAT
GTTGACCTTGATGGGTTGATTGAGCTCCTTCAAAACCGCCATGGTCAAAATAGTTCTTAC
ATTGGATGCATGAAATCTGGAGAAGTAGTTGCAGAAGAGGGAAGGGCATGGTATGAGCCA
GAATGGTGGAAATTCGGAGATGAGAAATCGTACTTCCGGCATGCAGCTGGTTCGGTTCTG
GTGCTTTCCAAAAATTTGGCTCAGTATATTAACATAAACAGTGCTTCCTTGAAGAGTTAT
GCGCATGAAGATACATCAATTGGATCATGGATGATGGGTCTTCAGACAACTTACATAGAT
GACAGCCGCCTATGCTGTAGCACCTCCGGACAAGGTAAACAACAAAGTGTGCTCATTGGC
TTGAACAGGAAAGATGTCATTCTGTCTCGTCTTGCTAGGACAACTATTCCATTCGTTTTT
ATTGGAGCATACCATAACTCGAAAATGGAAACATCCTGTTTCATCCCCAGGTACCATTGA

Peptide Sequence

PEP ID

XP_016479888.1
PEP Infomation

PREDICTED: hydroxyproline O-galactosyltransferase HPGT3-like isoform X3 [Nicotiana tabacum]
Sequence

MLTVEDKLMVLGCKELERRIVEVEMELTVAKSQGYLKNQLKHSGSSSGKQLLAVIGIYTG
FGGRLRRNVIRGSWLPNVDALSKLEERGVVVRFVIGRSPNRGDSLDRNINEENRETKDFL
ILESHEEAQEELPKKAKYFFSSAIQNWDAEFYVKVDDNIDVDLDGLIELLQNRHGQNSSY
IGCMKSGEVVAEEGRAWYEPEWWKFGDEKSYFRHAAGSVLVLSKNLAQYININSASLKSY
AHEDTSIGSWMMGLQTTYIDDSRLCCSTSGQGKQQSVLIGLNRKDVILSRLARTTIPFVF
IGAYHNSKMETSCFIPRYH

Transcript Sequence

Gene sequence data has not been registered.